STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000006054annotation not available (261 aa)    
Predicted Functional Partners:
Aasdh
LOW QUALITY PROTEIN: acyl-CoA synthetase family member 4.
  
 0.727
ENSCCNP00000016497
Hydroxysteroid dehydrogenase-like protein 2.
  
 0.620
ENSCCNP00000016506
LOW QUALITY PROTEIN: hydroxysteroid dehydrogenase-like protein 2.
  
 0.620
ENSCCNP00000024019
Hydroxysteroid dehydrogenase-like protein 2.
  
 0.620
Med23
Mediator of RNA polymerase II transcription subunit 23 isoform X1.
   
 0.568
Nup205
LOW QUALITY PROTEIN: nuclear pore complex protein Nup205.
   
 0.568
Med15
Mediator of RNA polymerase II transcription subunit 15 isoform X1.
   
 0.560
Med10
Mediator of RNA polymerase II transcription subunit 10.
    
 0.527
Nup54
Nuclear pore complex protein Nup54.
   
 0.524
ENSCCNP00000032449
Mediator of RNA polymerase II transcription subunit 6.
    
 0.521
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.