STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Stard8StAR-related lipid transfer protein 8 isoform X1. (1019 aa)    
Predicted Functional Partners:
ENSCCNP00000011408
annotation not available
 
      0.824
ENSCCNP00000007600
LOW QUALITY PROTEIN: stAR-related lipid transfer protein 9-like.
      
 0.577
Rbms1
RNA-binding motif, single-stranded-interacting protein 1 isoform X1.
      
 0.563
4930544G11Rik
Transforming protein RhoA-like isoform X1.
   
 0.493
Rhoc
Rho-related GTP-binding protein RhoC.
   
 0.493
Yipf6
Protein YIPF6.
 
    
 0.487
Tns3
LOW QUALITY PROTEIN: tensin-3.
    
 
 0.486
Tns2
Tensin-2 isoform X1.
    
 
 0.476
Rhob
Rho-related GTP-binding protein RhoB.
   
 0.476
Nxnl1
Nucleoredoxin-like protein 1.
   
  
 0.464
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.