STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmem176aLOW QUALITY PROTEIN: transmembrane protein 176A. (236 aa)    
Predicted Functional Partners:
Zdhhc3
Zinc finger, DHHC domain containing 3.
      
 0.759
Kcns1
Potassium voltage-gated channel delayed-rectifier subfamily S member 1.
      
 0.745
Gpnmb
Transmembrane glycoprotein NMB.
      
 0.718
Kcnh2
Potassium voltage-gated channel Eag-related subfamily H member 2.
      
 0.670
Tgm4
Transglutaminase 4 (prostate).
   
  
 0.668
Ms4a15
Membrane-spanning 4-domains, subfamily A, member 15.
   
  
 0.590
Aoc1
Amiloride-sensitive amine oxidase [copper-containing].
   
  
 0.587
Ms4a5
Membrane-spanning 4-domains subfamily A member 5/6/7.
      
 0.583
Ms4a12
Membrane-spanning 4-domains subfamily A member 3/4/8/12/15/18.
   
  
 0.578
Ms4a18
Membrane-spanning 4-domains subfamily A member 3/4/8/12/15/18.
      
 0.555
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.