STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tox2TOX high mobility group box family member 2 isoform X1. (524 aa)    
Predicted Functional Partners:
Slirp
SRA stem-loop-interacting RNA-binding protein, mitochondrial.
   
 0.571
Actr8
Actin-related protein 8 isoform X1.
    
 0.549
Actr5
LOW QUALITY PROTEIN: actin-related protein 5.
    
 0.532
Slc32a1
Solute carrier family 32 (vesicular inhibitory amino acid transporter).
   
  
 0.531
Gtf2h1
Transcription initiation factor TFIIH subunit 1.
    
 0.524
Ercc3
TFIIH basal transcription factor complex helicase XPB subunit isoform X1.
   
 0.515
Gtf2h3
General transcription factor IIH subunit 3 isoform X1.
    
 0.510
Polrmt
LOW QUALITY PROTEIN: DNA-directed RNA polymerase, mitochondrial.
    
 0.502
Gtf2h2
General transcription factor IIH subunit 2-like protein isoform X1.
   
 0.497
Polr1e
DNA-directed RNA polymerase I subunit RPA49.
    
 0.485
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.