Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Dkc1 | ENSCCNP00000001654 | ENSCCNP00000014493 | ENSCCNP00000001654 | H/ACA ribonucleoprotein complex subunit 4 isoform X1. | NHP2 ribonucleoprotein. | 0.999 |
Dkc1 | Fbl | ENSCCNP00000014493 | ENSCCNP00000007341 | H/ACA ribonucleoprotein complex subunit 4 isoform X1. | RRNA 2'-O-methyltransferase fibrillarin. | 0.982 |
Dkc1 | Heatr1 | ENSCCNP00000014493 | ENSCCNP00000028042 | H/ACA ribonucleoprotein complex subunit 4 isoform X1. | U3 small nucleolar RNA-associated protein 10. | 0.698 |
Dkc1 | Nol6 | ENSCCNP00000014493 | ENSCCNP00000020590 | H/ACA ribonucleoprotein complex subunit 4 isoform X1. | U3 small nucleolar RNA-associated protein 22. | 0.645 |
Dkc1 | Nop56 | ENSCCNP00000014493 | ENSCCNP00000001864 | H/ACA ribonucleoprotein complex subunit 4 isoform X1. | Nucleolar protein 56. | 0.997 |
Dkc1 | Nop58 | ENSCCNP00000014493 | ENSCCNP00000031602 | H/ACA ribonucleoprotein complex subunit 4 isoform X1. | Nucleolar protein 58 isoform X1. | 0.996 |
Dkc1 | Rrp9 | ENSCCNP00000014493 | ENSCCNP00000020686 | H/ACA ribonucleoprotein complex subunit 4 isoform X1. | U3 small nucleolar RNA-interacting protein 2. | 0.595 |
Dkc1 | Snu13 | ENSCCNP00000014493 | ENSCCNP00000000369 | H/ACA ribonucleoprotein complex subunit 4 isoform X1. | U4/U6 small nuclear ribonucleoprotein SNU13. | 0.976 |
Dkc1 | Utp15 | ENSCCNP00000014493 | ENSCCNP00000025279 | H/ACA ribonucleoprotein complex subunit 4 isoform X1. | U3 small nucleolar RNA-associated protein 15 homolog. | 0.525 |
Dkc1 | Utp4 | ENSCCNP00000014493 | ENSCCNP00000032629 | H/ACA ribonucleoprotein complex subunit 4 isoform X1. | U3 small nucleolar RNA-associated protein 4 homolog. | 0.579 |
ENSCCNP00000001654 | Dkc1 | ENSCCNP00000001654 | ENSCCNP00000014493 | NHP2 ribonucleoprotein. | H/ACA ribonucleoprotein complex subunit 4 isoform X1. | 0.999 |
ENSCCNP00000001654 | Fbl | ENSCCNP00000001654 | ENSCCNP00000007341 | NHP2 ribonucleoprotein. | RRNA 2'-O-methyltransferase fibrillarin. | 0.973 |
ENSCCNP00000001654 | Heatr1 | ENSCCNP00000001654 | ENSCCNP00000028042 | NHP2 ribonucleoprotein. | U3 small nucleolar RNA-associated protein 10. | 0.806 |
ENSCCNP00000001654 | Nol6 | ENSCCNP00000001654 | ENSCCNP00000020590 | NHP2 ribonucleoprotein. | U3 small nucleolar RNA-associated protein 22. | 0.701 |
ENSCCNP00000001654 | Nop56 | ENSCCNP00000001654 | ENSCCNP00000001864 | NHP2 ribonucleoprotein. | Nucleolar protein 56. | 0.988 |
ENSCCNP00000001654 | Nop58 | ENSCCNP00000001654 | ENSCCNP00000031602 | NHP2 ribonucleoprotein. | Nucleolar protein 58 isoform X1. | 0.987 |
ENSCCNP00000001654 | Rrp9 | ENSCCNP00000001654 | ENSCCNP00000020686 | NHP2 ribonucleoprotein. | U3 small nucleolar RNA-interacting protein 2. | 0.860 |
ENSCCNP00000001654 | Snu13 | ENSCCNP00000001654 | ENSCCNP00000000369 | NHP2 ribonucleoprotein. | U4/U6 small nuclear ribonucleoprotein SNU13. | 0.952 |
ENSCCNP00000001654 | Utp15 | ENSCCNP00000001654 | ENSCCNP00000025279 | NHP2 ribonucleoprotein. | U3 small nucleolar RNA-associated protein 15 homolog. | 0.814 |
ENSCCNP00000001654 | Utp4 | ENSCCNP00000001654 | ENSCCNP00000032629 | NHP2 ribonucleoprotein. | U3 small nucleolar RNA-associated protein 4 homolog. | 0.822 |
page 1 of 6