STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000007542Polypeptide N-acetylgalactosaminyltransferase 18. (270 aa)    
Predicted Functional Partners:
ENSCCNP00000008936
annotation not available
 
  
  0.938
Osbpl6
Oxysterol-binding protein-related protein 6 isoform X1.
      
 0.665
Tnrc18
Trinucleotide repeat-containing gene 18 protein isoform X1.
   
 
 0.664
Dnpep
Aspartyl aminopeptidase isoform X1.
      
 0.653
Ncaph2
Condensin-2 complex subunit H2.
      
 0.603
Sez6l
LOW QUALITY PROTEIN: seizure 6-like protein.
   
 0.581
Mrpl54
39S ribosomal protein L54, mitochondrial.
      
 0.549
Triml1
Probable E3 ubiquitin-protein ligase TRIML1.
      
 0.454
Art3
Ecto-ADP-ribosyltransferase 3 isoform X1.
      
 0.446
Rcl1
RNA 3'-terminal phosphate cyclase-like protein isoform X1.
      
 0.445
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.