STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000008073Diphthine--ammonia ligase isoform X1. (149 aa)    
Predicted Functional Partners:
Dph6
Diphthamine biosynthesis 6.
 
      0.900
Dph5
LOW QUALITY PROTEIN: diphthine methyl ester synthase.
  
 
 0.888
Eef2
Elongation factor 2.
    
 0.744
Dph7
Diphthine methyl ester acylhydrolase.
      
 0.533
ENSCCNP00000003158
annotation not available
    
 0.507
Eftud2
116 kDa U5 small nuclear ribonucleoprotein component.
    
 0.507
ENSCCNP00000022911
Elongation factor-like GTPase 1 isoform X1.
    
 0.507
ENSCCNP00000026593
annotation not available
    
 0.507
Gfm1
Elongation factor G, mitochondrial.
    
 0.507
ENSCCNP00000029765
116 kDa U5 small nuclear ribonucleoprotein component-like.
    
 0.507
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.