STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ublcp1Ubiquitin-like domain-containing CTD phosphatase 1 isoform X1. (318 aa)    
Predicted Functional Partners:
Psmd2
26S proteasome non-ATPase regulatory subunit 2.
   
 0.996
Psmd12
26S proteasome non-ATPase regulatory subunit 12.
   
 0.971
Psmd7
26S proteasome non-ATPase regulatory subunit 7.
   
 0.968
ENSCCNP00000000229
26S proteasome regulatory subunit T1.
   
 0.967
Psmc5
26S proteasome regulatory subunit T6.
   
 0.965
Psmc4
26S proteasome regulatory subunit T3.
   
 0.959
Psmc1
26S protease regulatory subunit 4 isoform X1.
   
 0.959
Psmd6
26S proteasome non-ATPase regulatory subunit 6.
   
 0.958
Psmd8
26S proteasome non-ATPase regulatory subunit 8.
   
 0.955
Psmd13
26S proteasome non-ATPase regulatory subunit 13.
   
 0.949
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.