STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000008185annotation not available (66 aa)    
Predicted Functional Partners:
Ubxn7
UBX domain-containing protein 7.
   
 0.990
Cul2
LOW QUALITY PROTEIN: cullin-2.
   
 0.959
Cul5
Cullin 5.
    
 0.955
Vhl
LOW QUALITY PROTEIN: von Hippel-Lindau disease tumor suppressor.
   
 0.954
Rbx1
E3 ubiquitin-protein ligase RBX1.
   
 0.947
Eloa
Transcription elongation factor B polypeptide 3 isoform X1.
    
 0.946
Hif1a
Hypoxia-inducible factor 1-alpha isoform X1.
    
 0.923
Socs2
Suppressor of cytokine signaling 2.
    
 0.916
ENSCCNP00000013430
annotation not available
   
 0.912
Elob
Transcription elongation factor B polypeptide 2.
   
 0.912
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.