STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chst13Chondroitin 4-sulfotransferase 13. (334 aa)    
Predicted Functional Partners:
Chst11
Carbohydrate sulfotransferase 11 isoform X1.
  
  
 
0.902
Chst12
Chondroitin 4-sulfotransferase 12.
     
0.900
Chst7
Chondroitin 6-sulfotransferase 7.
      
 0.679
Defb25
Beta-defensin 124.
      
 0.547
Csgalnact2
Chondroitin sulfate N-acetylgalactosaminyltransferase 2 isoform X1.
      
 0.530
Csgalnact1
Chondroitin sulfate N-acetylgalactosaminyltransferase 1/2.
      
 0.527
Chst5
Carbohydrate 6-sulfotransferase 6.
   
  
 0.505
Proz
Vitamin K-dependent protein Z.
      
 0.454
Chst4
Carbohydrate 6-sulfotransferase 4.
   
  
 0.417
Hapln1
Hyaluronan and proteoglycan link protein 1.
     
 0.415
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.