STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Grtp1Growth hormone-regulated TBC protein 1. (342 aa)    
Predicted Functional Partners:
Adprhl1
LOW QUALITY PROTEIN: protein ADP-ribosylarginine hydrolase-like protein 1.
 
    
 0.600
Arf6
ADP-ribosylation factor 6.
   
 0.599
Pcid2
Nuclear mRNA export protein PCID2/THP1.
 
    
 0.584
Tmco3
LOW QUALITY PROTEIN: transmembrane and coiled-coil domain-containing protein 3.
      
 0.559
Nrde2
Protein NRDE2 homolog isoform X1.
    
 
 0.528
Fbxo15
F-box only protein 15 isoform X1.
   
  
 0.501
Micos10
Mitochondrial inner membrane organizing system protein 1.
      
 0.495
Tcf24
Transcription factor 24.
      
 0.482
Cfap126
Protein Flattop.
   
   0.478
1700013F07Rik
Uncharacterized protein C1orf194 homolog.
   
   0.468
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.