STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Igsf3Immunoglobulin superfamily, member 2/3. (1197 aa)    
Predicted Functional Partners:
Gdap2
Ganglioside-induced differentiation-associated protein 2 isoform X1.
     
 0.596
Ttc12
LOW QUALITY PROTEIN: tetratricopeptide repeat protein 12.
    
 
 0.535
Wdr3
U3 small nucleolar RNA-associated protein 12.
      
 0.489
Apmap
Adipocyte plasma membrane-associated protein.
      
 0.453
Ankk1
Ankyrin repeat and protein kinase domain-containing protein 1.
    
 0.450
Lrfn1
LOW QUALITY PROTEIN: leucine-rich repeat and fibronectin type III domain-containing protein 1.
    
 0.412
Ptk7
Inactive tyrosine-protein kinase 7.
   
 0.410
Rabgef1
Rab5 GDP/GTP exchange factor isoform X1.
    
 0.410
Cep78
Centrosomal protein of 78 kDa.
      
 0.410
Ubxn11
LOW QUALITY PROTEIN: UBX domain-containing protein 11.
      
 0.402
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.