STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Agbl4Cytosolic carboxypeptidase protein 6. (349 aa)    
Predicted Functional Partners:
Ttll4
Tubulin polyglutamylase TTLL4 isoform X1.
   
 
 0.686
Bend5
BEN domain-containing protein 5 isoform X1.
 
   
 0.621
Bcl2l14
Apoptosis facilitator Bcl-2-like protein 14.
      
 0.610
Dpf3
BRG1-associated factor 45B/C.
      
 0.604
Ttll5
LOW QUALITY PROTEIN: tubulin polyglutamylase TTLL5.
      
 0.568
Dpf1
Zinc finger protein neuro-d4 isoform X1.
      
 0.461
Ttll12
Tubulin--tyrosine ligase-like protein 12.
      
 0.446
Kif18a
Kinesin family member 18/19.
      
 0.446
Kif2b
Kinesin family member 2/24.
   
  
 0.437
Kif2c
Kinesin-like protein KIF2C isoform X1.
   
  
 0.419
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.