STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sco2Protein SCO2 homolog, mitochondrial isoform X1. (257 aa)    
Predicted Functional Partners:
Trp53
Cellular tumor antigen p53 isoform X1.
    
 0.934
ENSCCNP00000010409
Cytochrome c oxidase assembly protein COX15 homolog.
  
 0.872
ENSCCNP00000009227
Cytochrome b-c1 complex subunit Rieske, mitochondrial.
     
 0.788
ENSCCNP00000002080
Cytochrome c oxidase assembly protein COX11, mitochondrial.
  
 
 0.785
Surf1
Surfeit gene 1.
  
  
 0.602
ENSCCNP00000016426
Chloride channel CLIC-like protein 1.
  
  
 0.585
ENSCCNP00000009049
Cytochrome c, somatic.
    
 0.559
ENSCCNP00000027173
annotation not available
    
 0.559
ENSCCNP00000005519
annotation not available
    
 
 0.543
ENSCCNP00000008732
Cytochrome c oxidase assembly protein subunit 17.
    
 
 0.543
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.