STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plxnb2Plexin-B2. (1848 aa)    
Predicted Functional Partners:
Sema4d
Semaphorin-4D isoform X1.
    
 0.990
Sema4c
Semaphorin-4C.
   
0.974
Arhgef12
Rho guanine nucleotide exchange factor 12 isoform X1.
    
 0.974
Rnd1
Rho-related GTP-binding protein Rho6.
    
 0.970
Sema4a
Semaphorin-4A.
    
0.966
Sema4g
Semaphorin-4G.
   
0.962
Met
Hepatocyte growth factor receptor isoform X1.
    
0.959
Sema4b
Semaphorin-4B isoform X1.
    
0.959
Sema4f
Semaphorin-4F isoform X1.
   
 0.950
Rras
Ras-related protein R-Ras isoform X1.
    
 0.949
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.