STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000008854annotation not available (73 aa)    
Predicted Functional Partners:
Sema3a
Semaphorin-3A.
    
 0.812
Nrp1
Neuropilin-1 isoform X1.
    
 0.789
Sema6a
Semaphorin-6A.
    
 0.710
Sema6d
Semaphorin-6D isoform X1.
    
 0.617
Sema7a
Semaphorin-7A.
    
 0.599
Sema4d
Semaphorin-4D isoform X1.
    
 0.587
Sema3b
Semaphorin-3B.
    
 0.583
Sema6b
LOW QUALITY PROTEIN: semaphorin-6B.
    
 0.558
Sema3e
LOW QUALITY PROTEIN: semaphorin-3E.
    
 0.551
Sema3g
Semaphorin-3G.
    
 0.525
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.