STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000008889annotation not available (204 aa)    
Predicted Functional Partners:
ENSCCNP00000017715
RNA-binding protein 25-like.
   
 0.872
Sf1
Splicing factor 1 isoform X1.
   
 0.706
Ccar1
Cell division cycle and apoptosis regulator 1.
   
  0.699
U2surp
U2 snRNP-associated SURP motif-containing protein isoform X1.
   
 
 0.642
Sf3a1
Splicing factor 3A subunit 1.
   
 
 0.631
Tpr
LOW QUALITY PROTEIN: nucleoprotein TPR.
   
  0.628
Tcerg1
Transcription elongation regulator 1 isoform X1.
   
 0.622
Srrm1
Serine/arginine repetitive matrix protein 1 isoform X1.
   
 0.618
Xrn2
5'-3' exoribonuclease 2 isoform X1.
   
  
 0.594
Mib2
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.586
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.