STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000008905annotation not available (203 aa)    
Predicted Functional Partners:
Upf2
Regulator of nonsense transcripts 2.
   
 0.957
Upf1
Regulator of nonsense transcripts 1 isoform X1.
    
 0.940
Eif4a3
Eukaryotic initiation factor 4A-III.
   
 0.936
Rbm8a
RNA-binding protein 8A isoform X1.
    
 0.925
Rnps1
Ribonucleic acid binding protein S1.
   
 0.922
Alyref
THO complex subunit 4.
    
 0.919
Srrm1
Serine/arginine repetitive matrix protein 1 isoform X1.
    
 0.916
Casc3
Protein CASC3 isoform X1.
    
 0.905
ENSCCNP00000000273
E3 SUMO-protein ligase RanBP2-like isoform X1.
   
 
 0.878
ENSCCNP00000007546
Telomerase-binding protein EST1A-like.
   
 0.850
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.