STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MrtfaMKL/myocardin-like protein 1 isoform X1. (965 aa)    
Predicted Functional Partners:
Srf
Serum response factor isoform X1.
    
 0.928
Kpna2
Importin subunit alpha-1 isoform X1.
    
 
 0.636
Phactr1
Phosphatase and actin regulator 1 isoform X1.
   
  
 0.596
Scai
Protein SCAI.
   
 
 0.593
Map2k4
Dual specificity mitogen-activated protein kinase kinase 4 isoform X1.
   
 0.587
Mib2
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.566
Map2k5
Mitogen-activated protein kinase kinase 5.
   
 0.549
Map2k2
Dual specificity mitogen-activated protein kinase kinase 2 isoform X1.
   
 0.549
Map2k1
Dual specificity mitogen-activated protein kinase kinase 1 isoform X1.
   
 0.549
Nbr1
Next to BRCA1 gene 1 protein isoform X1.
    
 0.537
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.