STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mrpl1239S ribosomal protein L12, mitochondrial. (199 aa)    
Predicted Functional Partners:
Mrpl33
39S ribosomal protein L33, mitochondrial.
  
 
 0.999
Mrpl19
39S ribosomal protein L19, mitochondrial.
   
 
 0.999
Mrpl27
39S ribosomal protein L27, mitochondrial.
  
 
 0.999
Mrpl21
39S ribosomal protein L21, mitochondrial isoform X1.
   
 
 0.999
Rps15
Small subunit ribosomal protein S15e.
  
 
 0.999
Mrpl32
39S ribosomal protein L32, mitochondrial.
  
 
 0.999
Mrpl20
39S ribosomal protein L20, mitochondrial.
   
 
 0.999
Rpl5
60S ribosomal protein L5 isoform X1.
  
 
 0.999
Mrps16
LOW QUALITY PROTEIN: 28S ribosomal protein S16, mitochondrial.
   
 
 0.999
Rpl11
Large subunit ribosomal protein L11e.
  
 
 0.999
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.