STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc16a4MFS transporter, MCT family, solute carrier family 16 (monocarboxylic acid transporters), member 4. (456 aa)    
Predicted Functional Partners:
Bsg
Basigin.
    
 0.775
Emb
Embigin isoform X1.
   
 0.587
ENSCCNP00000008174
Solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17.
   
  
 0.582
ENSCCNP00000004966
Ventricular zone-expressed PH domain-containing protein homolog 1.
      
 0.562
Car9
Carbonic anhydrase 9 isoform X1.
   
  
 0.556
Megf11
Multiple epidermal growth factor-like domains protein 11 isoform X1.
      
 0.552
Slc4a5
Solute carrier family 4 (sodium bicarbonate cotransporter), member 5.
      
 0.474
Slc22a7
MFS transporter, OCT family, solute carrier family 22 (organic anion transporter), member 7.
   
 
 0.469
ENSCCNP00000006414
annotation not available
      
 0.445
Ccdc117
Coiled-coil domain-containing protein 117 isoform X1.
      
 0.445
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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