STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rpl38Large subunit ribosomal protein L38e. (155 aa)    
Predicted Functional Partners:
ENSCCNP00000006766
annotation not available
   
 0.998
Fau
Ubiquitin-like protein fubi and ribosomal protein S30.
   
 0.998
ENSCCNP00000026563
annotation not available
   
 0.998
Rpl5
60S ribosomal protein L5 isoform X1.
   
 0.985
Rpl29
Large subunit ribosomal protein L29e.
   
 0.985
Rpl24
Large subunit ribosomal protein L24e.
   
 0.984
Rpl32
Large subunit ribosomal protein L32e.
   
 0.984
Rpl14
Large subunit ribosomal protein L14e.
   
 0.983
Rpl19
Large subunit ribosomal protein L19e.
   
 0.976
Rpl6
60S ribosomal protein L6 isoform X1.
   
 0.975
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.