STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dus1lTRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like isoform X1. (470 aa)    
Predicted Functional Partners:
Trmt11
TRNA (guanine(10)-N2)-methyltransferase homolog.
   
  
 0.837
Wdr36
U3 small nucleolar RNA-associated protein 21.
   
   0.836
Eprs
LOW QUALITY PROTEIN: bifunctional glutamate/proline--tRNA ligase.
  
 
 0.768
Utp3
LOW QUALITY PROTEIN: something about silencing protein 10.
   
    0.732
Bysl
Essential nuclear protein 1.
   
    0.730
Rpf1
Ribosome production factor 1 isoform X1.
   
    0.729
Noc4l
Nucleolar complex protein 4 homolog isoform X1.
   
    0.729
Imp4
U3 small nucleolar ribonucleoprotein protein IMP4.
   
    0.729
Rrs1
Ribosome biogenesis regulatory protein homolog.
   
    0.720
Trmt61a
TRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit.
   
  
 0.699
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.