ENSCCNP00000009758 protein (Castor canadensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSCCNP00000009758

annotation not available (57 aa)

Predicted Functional Partners:

Hspa9

0.583

Hsph1

0.567

Hspa4l

0.567

Hspa4

0.567

Hspa5

0.564

Sod2

0.528

Clpb

0.520

Ankrd45

0.505

Tsc1

0.495

Hsp90aa1

0.495

Your Current Organism:

Castor canadensis

NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Ankrd45	Clpb	ENSCCNP00000024878	ENSCCNP00000006847	Ankyrin repeat domain-containing protein 45.	ATP-dependent Clp protease ATP-binding subunit ClpB.	0.735
Ankrd45	ENSCCNP00000009758	ENSCCNP00000024878	ENSCCNP00000009758	Ankyrin repeat domain-containing protein 45.	annotation not available	0.505
Ankrd45	Hsp90aa1	ENSCCNP00000024878	ENSCCNP00000012376	Ankyrin repeat domain-containing protein 45.	Heat shock protein HSP 90-alpha.	0.651
Ankrd45	Hspa4	ENSCCNP00000024878	ENSCCNP00000030194	Ankyrin repeat domain-containing protein 45.	LOW QUALITY PROTEIN: heat shock 70 kDa protein 4.	0.660
Ankrd45	Hspa4l	ENSCCNP00000024878	ENSCCNP00000029424	Ankyrin repeat domain-containing protein 45.	Heat shock 70 kDa protein 4L.	0.660
Ankrd45	Hspa9	ENSCCNP00000024878	ENSCCNP00000027201	Ankyrin repeat domain-containing protein 45.	Stress-70 protein, mitochondrial.	0.694
Ankrd45	Hsph1	ENSCCNP00000024878	ENSCCNP00000003469	Ankyrin repeat domain-containing protein 45.	Heat shock protein 105 kDa.	0.660
Ankrd45	Tsc1	ENSCCNP00000024878	ENSCCNP00000007329	Ankyrin repeat domain-containing protein 45.	LOW QUALITY PROTEIN: hamartin.	0.651
Clpb	Ankrd45	ENSCCNP00000006847	ENSCCNP00000024878	ATP-dependent Clp protease ATP-binding subunit ClpB.	Ankyrin repeat domain-containing protein 45.	0.735
Clpb	ENSCCNP00000009758	ENSCCNP00000006847	ENSCCNP00000009758	ATP-dependent Clp protease ATP-binding subunit ClpB.	annotation not available	0.520
Clpb	Hsp90aa1	ENSCCNP00000006847	ENSCCNP00000012376	ATP-dependent Clp protease ATP-binding subunit ClpB.	Heat shock protein HSP 90-alpha.	0.694
Clpb	Hspa4	ENSCCNP00000006847	ENSCCNP00000030194	ATP-dependent Clp protease ATP-binding subunit ClpB.	LOW QUALITY PROTEIN: heat shock 70 kDa protein 4.	0.795
Clpb	Hspa4l	ENSCCNP00000006847	ENSCCNP00000029424	ATP-dependent Clp protease ATP-binding subunit ClpB.	Heat shock 70 kDa protein 4L.	0.789
Clpb	Hspa5	ENSCCNP00000006847	ENSCCNP00000010868	ATP-dependent Clp protease ATP-binding subunit ClpB.	Endoplasmic reticulum chaperone BiP.	0.751
Clpb	Hspa9	ENSCCNP00000006847	ENSCCNP00000027201	ATP-dependent Clp protease ATP-binding subunit ClpB.	Stress-70 protein, mitochondrial.	0.900
Clpb	Hsph1	ENSCCNP00000006847	ENSCCNP00000003469	ATP-dependent Clp protease ATP-binding subunit ClpB.	Heat shock protein 105 kDa.	0.789
Clpb	Sod2	ENSCCNP00000006847	ENSCCNP00000017798	ATP-dependent Clp protease ATP-binding subunit ClpB.	Superoxide dismutase [Mn], mitochondrial.	0.761
Clpb	Tsc1	ENSCCNP00000006847	ENSCCNP00000007329	ATP-dependent Clp protease ATP-binding subunit ClpB.	LOW QUALITY PROTEIN: hamartin.	0.694
ENSCCNP00000009758	Ankrd45	ENSCCNP00000009758	ENSCCNP00000024878	annotation not available	Ankyrin repeat domain-containing protein 45.	0.505
ENSCCNP00000009758	Clpb	ENSCCNP00000009758	ENSCCNP00000006847	annotation not available	ATP-dependent Clp protease ATP-binding subunit ClpB.	0.520