STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ttll1Probable tubulin polyglutamylase TTLL1. (423 aa)    
Predicted Functional Partners:
Edc3
Enhancer of mRNA-decapping protein 3.
    
 
 0.859
ENSCCNP00000023297
Leucine-rich repeat-containing protein 49.
   
 0.798
Tpgs2
Tubulin polyglutamylase complex subunit 2.
   
 0.760
Nicn1
Nicolin-1 isoform X1.
   
 0.748
Tpgs1
Tubulin polyglutamylase complex subunit 1 isoform X1.
    
 0.739
Tbc1d19
TBC1 domain family member 19.
   
 
 0.619
1110051M20Rik
UPF0705 protein C11orf49 homolog.
    
 
 0.577
Rhod
Rho-related GTP-binding protein RhoD.
      
 0.570
Rhpn1
Rhophilin, Rho GTPase binding protein 1.
      
 0.565
Ttll12
Tubulin--tyrosine ligase-like protein 12.
      
0.561
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.