STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ttll3LOW QUALITY PROTEIN: tubulin monoglycylase TTLL3. (278 aa)    
Predicted Functional Partners:
ENSCCNP00000009845
annotation not available
 
 
   0.927
Arpc4
Actin related protein 2/3 complex, subunit 4.
 
      0.675
Dcp2
M7GpppN-mRNA hydrolase isoform X1.
    
 
 0.519
Arpc3
Actin related protein 2/3 complex, subunit 3.
    
   0.447
ENSCCNP00000013891
annotation not available
    
   0.439
Arpc2
Actin related protein 2/3 complex, subunit 2.
    
   0.439
Naxe
NAD(P)H-hydrate epimerase.
    
 
 0.435
Edc3
Enhancer of mRNA-decapping protein 3.
    
 
 0.435
ENSCCNP00000017147
MRNA-decapping enzyme 1B-like.
    
 
 0.407
Dcp1b
MRNA-decapping enzyme 1B.
    
 
 0.407
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.