STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CidecCell death activator CIDE-3 isoform X1. (239 aa)    
Predicted Functional Partners:
Plin1
Perilipin-1.
   
  
 0.808
Cidea
Cell death activator CIDE-A.
  
 
0.746
Capns1
LOW QUALITY PROTEIN: calpain small subunit 1.
      
 0.580
Plpp3
Phospholipid phosphatase 3.
      
 0.577
Dffa
DNA fragmentation factor, 45 kD, alpha subunit.
      
0.573
Rdh8
Retinol dehydrogenase 8.
   
    0.570
Plin2
Perilipin-2.
   
  
 0.569
Lipe
Hormone-sensitive lipase isoform X1.
   
  
 0.565
Plin5
Perilipin 5.
   
  
 0.529
Pparg
Peroxisome proliferator-activated receptor gamma isoform X1.
   
 
 0.512
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.