STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000010175Afamin-like. (325 aa)    
Predicted Functional Partners:
Hrg
Histidine-rich glycoprotein.
   
  
 0.652
Apoh
Beta-2-glycoprotein 1.
   
  
 0.612
Apcs
Serum amyloid P-component-like.
   
  
 0.599
Kif12
Kinesin-like protein KIF12.
   
  
 0.567
Fbp1
Fructose-1,6-bisphosphatase 1.
   
  
 0.514
Azgp1
Zinc-alpha-2-glycoprotein.
   
 
 0.496
Masp2
Mannan-binding lectin serine protease 2.
   
   0.495
Apoa4
Apolipoprotein A-IV.
   
 0.487
Serpina6
LOW QUALITY PROTEIN: corticosteroid-binding globulin.
   
 0.450
Gc
Vitamin D-binding protein.
   
  
0.431
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.