STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ablim2Actin-binding LIM protein 2 isoform X1. (660 aa)    
Predicted Functional Partners:
Rac3
Ras-related C3 botulinum toxin substrate 3 isoform X1.
     
 0.912
Rac2
Ras-related C3 botulinum toxin substrate 2 isoform X1.
     
 0.912
Cdc42
Cell division control protein 42 homolog.
     
 0.910
Ablim3
LOW QUALITY PROTEIN: actin-binding LIM protein 3.
     
 
0.900
Sh3tc1
SH3 domain and tetratricopeptide repeat-containing protein 1.
      
 0.652
Abra
Actin-binding Rho-activating protein.
    
 
 0.614
Sorcs2
VPS10 domain-containing receptor SorCS2.
      
 0.497
Mesdc2
LDLR chaperone MESD.
      
 0.493
Sh3tc2
SH3 domain and tetratricopeptide repeat-containing protein 2-like.
      
 0.479
ENSCCNP00000025313
annotation not available
      
 0.470
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.