STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Agtpbp1Cytosolic carboxypeptidase 1 isoform X1. (100 aa)    
Predicted Functional Partners:
Agbl1
Cytosolic carboxypeptidase 4 isoform X1.
 
      0.895
ENSCCNP00000011313
LOW QUALITY PROTEIN: cytosolic carboxypeptidase 3-like.
 
 
  
 0.890
ENSCCNP00000030718
Cytosolic carboxypeptidase 2-like isoform X1.
 
    
 0.864
Ttll4
Tubulin polyglutamylase TTLL4 isoform X1.
   
 
 0.537
Suds3
Sin3 histone deacetylase corepressor complex component SDS3.
      
 0.412
ENSCCNP00000026469
annotation not available
      
 0.412
Loxhd1
Lipoxygenase homology domain-containing protein 1.
     
 0.407
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.