STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mxra8Matrix-remodelling associated 8. (445 aa)    
Predicted Functional Partners:
C1ql2
Complement C1q-like protein 2.
   
 
 0.672
Ldlrad3
Low-density lipoprotein receptor class A domain-containing protein 3.
      
 0.597
Mxra7
Matrix-remodeling-associated protein 7.
      
 0.555
Meak7
TLD domain-containing protein 1 isoform X1.
      
 0.545
B3gat3
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 isoform X1.
      
 0.528
ENSCCNP00000004830
Ficolin A.
   
  
 0.479
Dhx32
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 isoform X1.
      
 0.459
Vldlr
Very low density lipoprotein receptor.
      
 0.455
Efemp2
EGF-containing fibulin-like extracellular matrix protein 2 isoform X1.
   
  
 0.440
Arhgap22
Rho GTPase activating protein 22.
      
 0.438
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.