STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc25a22Solute carrier family 25 (mitochondrial glutamate transporter), member 18/22. (323 aa)    
Predicted Functional Partners:
Tbc1d24
LOW QUALITY PROTEIN: TBC1 domain family member 24.
      
 0.521
Pcdh19
Protocadherin delta 2.
      
 0.491
Slc38a3
Solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 3.
   
 
 0.467
Stxbp1
Syntaxin-binding protein 1.
      
 0.446
Timm10
Mitochondrial import inner membrane translocase subunit TIM10.
   
  
 0.443
Arhgef9
Rho guanine nucleotide exchange factor 9 isoform X1.
   
  
 0.423
Pnkp
Bifunctional polynucleotide phosphatase/kinase isoform X1.
      
 0.412
Slc7a2
Solute carrier family 7 (cationic amino acid transporter), member 2.
   
  
 0.408
Kcnq2
Potassium voltage-gated channel subfamily KQT member 2 isoform X1.
      
 0.405
Arx
Homeobox protein aristaless-related.
      
 0.404
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.