STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gadl1LOW QUALITY PROTEIN: acidic amino acid decarboxylase GADL1. (501 aa)    
Predicted Functional Partners:
Gad2
Glutamate decarboxylase 2.
  
0.960
Abat
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase.
  
 0.952
Cdo1
Cysteine dioxygenase type 1 isoform X1.
     
 0.946
Agxt2
Alanine-glyoxylate aminotransferase 2.
 
 0.942
ENSCCNP00000012143
Aldehyde dehydrogenase family 3 member B2-like.
   
 0.928
Aldh3b1
Aldehyde dehydrogenase family 3 member B1.
   
 0.928
Aldh3a1
Aldehyde dehydrogenase, dimeric NADP-preferring.
   
 0.928
Aldh3a2
Fatty aldehyde dehydrogenase isoform X1.
   
 0.928
Aldh2
LOW QUALITY PROTEIN: aldehyde dehydrogenase, mitochondrial.
   
 0.923
Aldh7a1
Alpha-aminoadipic semialdehyde dehydrogenase.
   
 0.923
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.