STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Banf2Barrier-to-autointegration factor-like protein. (90 aa)    
Predicted Functional Partners:
Emd
Emerin.
    
 0.908
ENSCCNP00000000578
annotation not available
   
 0.779
Lmna
Lamin A/C.
   
 0.749
Rbbp9
Putative hydrolase RBBP9.
      
 0.702
Ovol3
Putative transcription factor ovo-like protein 3.
      
 0.677
Snx6
Sorting nexin-5/6/32.
      
 0.651
Vrk1
Serine/threonine-protein kinase VRK1 isoform X1.
    
 0.629
ENSCCNP00000028487
Ankyrin repeat and LEM domain-containing protein 2-like.
    
 0.604
Snx5
Sorting nexin-5/6/32.
      
 0.603
ENSCCNP00000027195
LOW QUALITY PROTEIN: lamina-associated polypeptide 2, isoforms beta/gamma-like.
    
 0.577
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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