STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000010985Arylsulfatase H-like. (546 aa)    
Predicted Functional Partners:
ENSCCNP00000032449
Mediator of RNA polymerase II transcription subunit 6.
    
 
 0.745
Med31
Mediator of RNA polymerase II transcription subunit 31.
    
 
 0.725
Med7
Mediator of RNA polymerase II transcription subunit 7.
    
 
 0.721
Med14
Mediator of RNA polymerase II transcription subunit 14 isoform X1.
    
 
 0.715
Arsk
Arylsulfatase K.
  
 
 0.684
ENSCCNP00000013165
annotation not available
  
 0.683
ENSCCNP00000029739
annotation not available
  
 0.673
Sumf1
Sulfatase modifying factor 1.
  
 0.660
Med10
Mediator of RNA polymerase II transcription subunit 10.
    
 
 0.649
Sgsh
N-sulphoglucosamine sulphohydrolase.
  
 0.620
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.