STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Recql4RecQ protein-like 4. (1189 aa)    
Predicted Functional Partners:
Fancm
LOW QUALITY PROTEIN: Fanconi anemia group M protein.
   
 0.997
Exo1
Exonuclease 1.
  
 0.979
Top3a
DNA topoisomerase 3-alpha isoform X1.
  
 0.963
Rad51
DNA repair protein RAD51 homolog 1.
   
 0.952
Rpa1
Replication protein A 70 kDa DNA-binding subunit.
   
 0.943
Atr
LOW QUALITY PROTEIN: serine/threonine-protein kinase ATR.
   
 0.933
Mus81
Crossover junction endonuclease MUS81 isoform X1.
   
 0.932
Rmi1
RecQ-mediated genome instability protein 1.
   
 0.929
Xrcc3
DNA repair protein XRCC3 isoform X1.
   
 0.926
Rad52
DNA repair and recombination protein RAD52.
   
 0.923
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.