STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000011422annotation not available (80 aa)    
Predicted Functional Partners:
ENSCCNP00000022513
Cytochrome c oxidase subunit 7C, mitochondrial.
   
 0.888
Ndufa2
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2.
   
 0.881
Ndufa12
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12.
   
 0.858
Cox5a
Cytochrome c oxidase subunit 5A, mitochondrial.
   
 0.820
ENSCCNP00000029421
annotation not available
   
 0.797
Ndufa6
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6.
   
 0.797
Cox7a2
Cytochrome c oxidase subunit 7A2, mitochondrial.
   
 0.774
ENSCCNP00000019765
annotation not available
   
 0.773
ENSCCNP00000027665
Cytochrome c oxidase subunit 6C-2.
   
 0.773
Cox8a
Cytochrome c oxidase subunit 8A, mitochondrial.
   
 0.770
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.