STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Yae1d1Yae1 domain-containing protein 1. (87 aa)    
Predicted Functional Partners:
Oraov1
Oral cancer-overexpressed protein 1 isoform X1.
   
 
 0.947
Abce1
ATP-binding cassette sub-family E member 1 isoform X1.
    
 
 0.869
Ndor1
NADPH-dependent diflavin oxidoreductase 1 isoform X1.
      
 0.663
Mms19
MMS19 nucleotide excision repair protein homolog isoform X1.
      
 0.624
Ciapin1
Anamorsin.
      
 0.604
Xpot
Exportin-T isoform X1.
      
 0.579
Zc3h4
Zinc finger CCCH domain-containing protein 4.
      
 0.549
Abcb7
ATP-binding cassette sub-family B member 7, mitochondrial isoform X1.
      
 0.456
Fxn
Frataxin, mitochondrial.
      
 0.453
Elp3
Elongator complex protein 3 isoform X1.
      
 0.449
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.