STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tfap2dTranscription factor AP-2 delta. (452 aa)    
Predicted Functional Partners:
Kctd1
BTB/POZ domain-containing protein KCTD1 isoform X1.
   
 0.641
Kctd15
BTB/POZ domain-containing protein KCTD1/15.
   
 0.641
Zcchc3
Zinc finger CCHC domain-containing protein 3.
   
  
 0.615
Spata4
Spermatogenesis-associated protein 4.
      
 0.601
ENSCCNP00000021528
1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon.
      
 0.597
Ep300
Histone acetyltransferase p300.
    
 0.562
Crebbp
CREB-binding protein isoform X1.
    
 0.562
Yeats4
YEATS domain-containing protein 4 isoform X1.
    
 0.560
Tfap2a
Transcription factor AP-2-alpha isoform X1.
  
 
0.555
Cited2
Cbp/p300-interacting transactivator 2.
    
 0.536
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.