STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Letm1LETM1 and EF-hand domain-containing protein 1, mitochondrial. (708 aa)    
Predicted Functional Partners:
Micu2
Calcium uptake protein 2, mitochondrial.
      
 0.685
Mcur1
Mitochondrial calcium uniporter regulator 1.
    
 
 0.601
Pcgf3
Polycomb group RING finger protein 3.
      
 0.567
Trappc10
Trafficking protein particle complex subunit 10.
      
 0.566
Ogdh
2-oxoglutarate dehydrogenase, mitochondrial isoform X1.
   
 
 0.566
Tmem11
Transmembrane protein 11, mitochondrial isoform X1.
      
 0.560
Pomgnt1
Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1.
      
 0.554
Rpl8
Large subunit ribosomal protein L8e.
    
 
 0.510
ENSCCNP00000032767
Calcium uptake protein 1, mitochondrial-like.
      
 0.497
Rpl11
Large subunit ribosomal protein L11e.
    
   0.491
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.