STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hat1Histone aminotransferase 1. (347 aa)    
Predicted Functional Partners:
Nasp
LOW QUALITY PROTEIN: nuclear autoantigenic sperm protein.
   
 
 0.989
Orc3
Origin recognition complex subunit 3 isoform X1.
   
 
 0.957
Orc5
Origin recognition complex subunit 5 isoform X1.
    
 
 0.955
Orc2
Origin recognition complex subunit 2 isoform X1.
   
 
 0.944
Orc4
Origin recognition complex subunit 4.
    
 
 0.944
Rbbp7
Histone-binding protein RBBP7.
   
 0.908
ENSCCNP00000004142
annotation not available
   
 0.872
Rbbp4
Histone-binding protein RBBP4.
   
 0.872
ENSCCNP00000009574
annotation not available
   
 0.872
ENSCCNP00000022191
annotation not available
   
 0.872
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.