STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rims2Regulating synaptic membrane exocytosis protein 2 isoform X1. (285 aa)    
Predicted Functional Partners:
ENSCCNP00000006180
Regulating synaptic membrane exocytosis protein 2.
 
  
 0.993
ENSCCNP00000016574
Protein unc-13 homolog C-like.
    
 0.991
ENSCCNP00000016992
annotation not available
    
 0.991
Unc13a
Protein unc-13 homolog A.
    
 0.991
Unc13b
Protein unc-13 homolog B isoform X1.
    
 0.991
Rab3a
Ras-related protein Rab-3A.
    
 0.990
Rimbp2
RIMS binding protein 2.
    
 0.984
Tspoap1
Peripheral-type benzodiazepine receptor-associated protein 1 isoform X1.
    
 0.984
Rimbp3
RIMS-binding protein 3A-like.
    
 0.984
Rapgef4
Rap guanine nucleotide exchange factor 4 isoform X1.
    
 0.946
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.