STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Scarb2Lysosome membrane protein 2. (478 aa)    
Predicted Functional Partners:
Cd63
CD63 antigen.
     
 0.920
Tlr4
Toll-like receptor 4 isoform X1.
   
 0.820
Apob
Apolipoprotein B-100.
    
 0.802
Tlr2
Toll-like receptor 2.
   
 0.784
Thbs1
Thrombospondin 1.
   
 
 0.746
Cd47
CD47 antigen (Rh-related antigen, integrin-associated signal transducer).
   
  
 0.729
ENSCCNP00000019198
Glucosidase, beta, acid.
   
 
 0.713
Lyn
Tyrosine-protein kinase Lyn isoform X1.
    
 
 0.685
Apoa4
Apolipoprotein A-IV.
    
 0.671
Tfrc
Transferrin receptor protein 1 isoform X1.
   
 
 0.670
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.