Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Copb2 | Prr15 | ENSCCNP00000002523 | ENSCCNP00000013575 | Coatomer subunit beta' isoform X1. | Proline-rich protein 15. | 0.446 |
Prr15 | Copb2 | ENSCCNP00000013575 | ENSCCNP00000002523 | Proline-rich protein 15. | Coatomer subunit beta' isoform X1. | 0.446 |
Prr15 | Upk1b | ENSCCNP00000013575 | ENSCCNP00000008600 | Proline-rich protein 15. | Uroplakin-1b. | 0.410 |
Prr15 | Upk3b | ENSCCNP00000013575 | ENSCCNP00000017142 | Proline-rich protein 15. | Uroplakin 3B. | 0.402 |
Prr15 | Uxs1 | ENSCCNP00000013575 | ENSCCNP00000027268 | Proline-rich protein 15. | UDP-glucuronic acid decarboxylase 1 isoform X1. | 0.407 |
Upk1b | Prr15 | ENSCCNP00000008600 | ENSCCNP00000013575 | Uroplakin-1b. | Proline-rich protein 15. | 0.410 |
Upk1b | Upk3b | ENSCCNP00000008600 | ENSCCNP00000017142 | Uroplakin-1b. | Uroplakin 3B. | 0.767 |
Upk3b | Prr15 | ENSCCNP00000017142 | ENSCCNP00000013575 | Uroplakin 3B. | Proline-rich protein 15. | 0.402 |
Upk3b | Upk1b | ENSCCNP00000017142 | ENSCCNP00000008600 | Uroplakin 3B. | Uroplakin-1b. | 0.767 |
Uxs1 | Prr15 | ENSCCNP00000027268 | ENSCCNP00000013575 | UDP-glucuronic acid decarboxylase 1 isoform X1. | Proline-rich protein 15. | 0.407 |