Mettl11b protein (Castor canadensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Mettl11b

Alpha N-terminal protein methyltransferase 1B isoform X1. (283 aa)

Predicted Functional Partners:

Suox

0.718

Kifap3

0.597

Gamt

0.587

Fasn

0.483

Mettl18

0.472

Wbscr27

0.462

Aanat

0.460

Fgf18

0.448

Aasdh

0.448

Apmap

0.447

Your Current Organism:

Castor canadensis

NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Aanat	Mettl11b	ENSCCNP00000019155	ENSCCNP00000013687	Arylalkylamine N-acetyltransferase.	Alpha N-terminal protein methyltransferase 1B isoform X1.	0.460
Aasdh	Fasn	ENSCCNP00000006657	ENSCCNP00000009685	LOW QUALITY PROTEIN: acyl-CoA synthetase family member 4.	Fatty acid synthase, animal type.	0.977
Aasdh	Mettl11b	ENSCCNP00000006657	ENSCCNP00000013687	LOW QUALITY PROTEIN: acyl-CoA synthetase family member 4.	Alpha N-terminal protein methyltransferase 1B isoform X1.	0.448
Aasdh	Suox	ENSCCNP00000006657	ENSCCNP00000016247	LOW QUALITY PROTEIN: acyl-CoA synthetase family member 4.	Sulfite oxidase, mitochondrial isoform X1.	0.738
Apmap	Mettl11b	ENSCCNP00000005554	ENSCCNP00000013687	Adipocyte plasma membrane-associated protein.	Alpha N-terminal protein methyltransferase 1B isoform X1.	0.447
Fasn	Aasdh	ENSCCNP00000009685	ENSCCNP00000006657	Fatty acid synthase, animal type.	LOW QUALITY PROTEIN: acyl-CoA synthetase family member 4.	0.977
Fasn	Mettl11b	ENSCCNP00000009685	ENSCCNP00000013687	Fatty acid synthase, animal type.	Alpha N-terminal protein methyltransferase 1B isoform X1.	0.483
Fgf18	Mettl11b	ENSCCNP00000006221	ENSCCNP00000013687	Fibroblast growth factor 18.	Alpha N-terminal protein methyltransferase 1B isoform X1.	0.448
Gamt	Mettl11b	ENSCCNP00000007619	ENSCCNP00000013687	Guanidinoacetate N-methyltransferase.	Alpha N-terminal protein methyltransferase 1B isoform X1.	0.587
Gamt	Mettl18	ENSCCNP00000007619	ENSCCNP00000013562	Guanidinoacetate N-methyltransferase.	Histidine protein methyltransferase 1 homolog.	0.442
Gamt	Suox	ENSCCNP00000007619	ENSCCNP00000016247	Guanidinoacetate N-methyltransferase.	Sulfite oxidase, mitochondrial isoform X1.	0.573
Kifap3	Mettl11b	ENSCCNP00000013665	ENSCCNP00000013687	Kinesin-associated protein 3 isoform X1.	Alpha N-terminal protein methyltransferase 1B isoform X1.	0.597
Mettl11b	Aanat	ENSCCNP00000013687	ENSCCNP00000019155	Alpha N-terminal protein methyltransferase 1B isoform X1.	Arylalkylamine N-acetyltransferase.	0.460
Mettl11b	Aasdh	ENSCCNP00000013687	ENSCCNP00000006657	Alpha N-terminal protein methyltransferase 1B isoform X1.	LOW QUALITY PROTEIN: acyl-CoA synthetase family member 4.	0.448
Mettl11b	Apmap	ENSCCNP00000013687	ENSCCNP00000005554	Alpha N-terminal protein methyltransferase 1B isoform X1.	Adipocyte plasma membrane-associated protein.	0.447
Mettl11b	Fasn	ENSCCNP00000013687	ENSCCNP00000009685	Alpha N-terminal protein methyltransferase 1B isoform X1.	Fatty acid synthase, animal type.	0.483
Mettl11b	Fgf18	ENSCCNP00000013687	ENSCCNP00000006221	Alpha N-terminal protein methyltransferase 1B isoform X1.	Fibroblast growth factor 18.	0.448
Mettl11b	Gamt	ENSCCNP00000013687	ENSCCNP00000007619	Alpha N-terminal protein methyltransferase 1B isoform X1.	Guanidinoacetate N-methyltransferase.	0.587
Mettl11b	Kifap3	ENSCCNP00000013687	ENSCCNP00000013665	Alpha N-terminal protein methyltransferase 1B isoform X1.	Kinesin-associated protein 3 isoform X1.	0.597
Mettl11b	Mettl18	ENSCCNP00000013687	ENSCCNP00000013562	Alpha N-terminal protein methyltransferase 1B isoform X1.	Histidine protein methyltransferase 1 homolog.	0.472