STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000013705Tetratricopeptide repeat protein 30B. (665 aa)    
Predicted Functional Partners:
Ift52
Intraflagellar transport protein 52 homolog isoform X1.
    
 0.914
Ift88
LOW QUALITY PROTEIN: intraflagellar transport protein 88 homolog.
    
 0.912
Ttc26
Intraflagellar transport protein 56 isoform X1.
    
 0.909
Ift81
Intraflagellar transport protein 81 homolog isoform X1.
    
 0.904
Cluap1
LOW QUALITY PROTEIN: clusterin-associated protein 1.
   
 0.895
Ift80
Intraflagellar transport protein 80 homolog isoform X1.
    
 0.894
Ift172
Intraflagellar transport protein 172 homolog isoform X1.
   
 0.886
Ift57
Intraflagellar transport protein 57 homolog.
   
 0.884
ENSCCNP00000016104
TRAF3 interacting protein 1.
    
 0.880
Ift46
Intraflagellar transport protein 46 homolog.
    
 0.850
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.