STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ddx11LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase DDX11-like protein 8. (892 aa)    
Predicted Functional Partners:
Fndc10
Fibronectin type III domain containing 10.
    
 
 0.934
Sympk
LOW QUALITY PROTEIN: symplekin.
    
   0.934
Chtf18
CTF18, chromosome transmission fidelity factor 18.
   
 
 0.919
Ercc3
TFIIH basal transcription factor complex helicase XPB subunit isoform X1.
   
 0.906
ENSCCNP00000029727
annotation not available
 
    
 0.900
Wrn
Werner syndrome ATP-dependent helicase.
  
 0.899
Gtf2h2
General transcription factor IIH subunit 2-like protein isoform X1.
    
 0.895
Gtf2h1
Transcription initiation factor TFIIH subunit 1.
    
 0.894
Gtf2h3
General transcription factor IIH subunit 3 isoform X1.
    
 0.892
Gtf2h4
Transcription initiation factor TFIIH subunit 4.
    
 0.891
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.