STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmdn3Regulator of microtubule dynamics protein 3. (467 aa)    
Predicted Functional Partners:
Vapb
LOW QUALITY PROTEIN: vesicle-associated membrane protein-associated protein B/C.
    
 0.845
Osbpl5
LOW QUALITY PROTEIN: oxysterol-binding protein-related protein 5.
   
 
 0.718
Osbpl8
Oxysterol-binding protein-related protein 8 isoform X1.
   
 
 0.708
Ptpn1
Tyrosine-protein phosphatase non-receptor type 1 isoform X1.
    
 0.679
Rmdn2
Regulator of microtubule dynamics protein 2.
  
 
 
0.623
Mospd2
Motile sperm domain-containing protein 2.
   
 
 0.595
Mfn2
Mitofusin 2.
   
  
 0.567
Aasdh
LOW QUALITY PROTEIN: acyl-CoA synthetase family member 4.
     
 0.511
Vapa
Vesicle-associated membrane protein-associated protein A isoform X1.
    
 0.485
P3h3
Procollagen-proline 3-dioxygenase 3.
      
 0.471
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.