STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000014023Centlein-like. (262 aa)    
Predicted Functional Partners:
Lrrc45
Leucine-rich repeat-containing protein 45 isoform X1.
      
 0.719
Nin
LOW QUALITY PROTEIN: ninein.
      
 0.562
Samd4b
Protein Smaug homolog 2 isoform X1.
      
 0.556
Cep250
Centrosome-associated protein CEP250 isoform X1.
      
 0.552
Ccp110
Centriolar coiled-coil protein of 110 kDa isoform X1.
      
 0.545
ENSCCNP00000026727
annotation not available
      
 0.544
Plk4
Serine/threonine-protein kinase PLK4 isoform X1.
      
 0.491
Akap9
A-kinase anchor protein 9 isoform X1.
      
 0.485
Cntrob
LOW QUALITY PROTEIN: centrobin.
      
 0.483
Spata6
Spermatogenesis-associated protein 6 isoform X1.
      
 0.480
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.