STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000014095annotation not available (415 aa)    
Predicted Functional Partners:
ENSCCNP00000016651
annotation not available
 
      0.899
Rbpj
Recombining binding protein suppressor of hairless isoform X1.
   
 0.738
Notch1
Neurogenic locus notch homolog protein 1.
    
 0.649
Rbpjl
Recombining binding protein suppressor of hairless-like protein.
   
 0.576
Notch4
Notch 4.
    
 0.546
Ep300
Histone acetyltransferase p300.
   
 0.515
Crebbp
CREB-binding protein isoform X1.
   
 0.514
ENSCCNP00000000273
E3 SUMO-protein ligase RanBP2-like isoform X1.
   
 0.496
ENSCCNP00000017688
annotation not available
    
 0.480
Snw1
LOW QUALITY PROTEIN: SNW domain-containing protein 1.
   
 
 0.456
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.